Welcome to the ModCell2 Documentation!

This site incluse examples, usage tips, and comprehensive module documentation for the ModCell2 strain design tool.

The source code can be found at: https://github.com/trinhlab/modcell2

If you use any part of this software, please cite:

Sergio Garcia, Cong T. Trinh,
Multiobjective strain design: A framework for modular cell engineering,
Metabolic Engineering,
Volume 51,
2019,
Pages 110-120,
ISSN 1096-7176,
https://doi.org/10.1016/j.ymben.2018.09.003.

Contents:

• Basic documentation for ModCell2
  • 1   Quick start
  • 2   Input files
  • 3   Parent model
  • 4   ModCell2 features
• Examples
  • Example network model
  • E. coli core model with fixed module reactions
• Module documentation
  • Prodnet
  • MCdesign
  • ResAnalysis
  • Support

• Index